About the Data Science Laboratory

The Data Science Laboratory (DSL) is hosted by the Department for Mathematical Sciences and the Department for Computer Science, and is one of five data science labs at the University of Copenhagen. The Lab is funded by the Faculty of SCIENCE and the  University of Copenhagen. The Lab was originally started January 1, 2013 as the Laboratory for Applied Statistics. From 2018, the Lab was expanded to include computer science expertise.

The overall aim of the laboratory is to enhance the quality of data analyses in research carried out at SCIENCE. This is promoted by inter-disciplinary collaborations where Data Science researchers are available to all Departments at SCIENCE. In our setting, Data Science includes:

  • Data acquisition (measurements, signals, images, …)
  • Data processing (including design of algorithms and statistical models and large-scale computations)
  • Results analysis (statistically well-founded conclusions)
  • Using HPC resources when relevant
  • Storage and publication of data and results

We aim to further develop and extend cross-disciplinary activities at SCIENCE. This will happen through the following activities:

  • Guidance of students and researchers
  • Courses
  • Workshops
  • Collaboration with researchers

 

 

 

Cross-disciplinary publications involving data science, from researchers associated to the lab:

2023

  1. CY Chow, AC Bech, H Sørensen, A Olsen, WLP Bredie (2023). Individual differences in young children’s food texture preferences. Measurement, sociodemographic and psychological correlates. Accepted for Food Quality and Preference.
  2. CSY Eriksen, MD Walli, DB Van de Waal, NR Helmsing, EO Dahl, H Sørensenc, PJ Hansen (2023). The combined effect of pH and dissolved inorganic carbon concentrations on the physiology of plastidic ciliate Mesodinium rubrum and its cryptophyte prey. Accepted for Harmful Algae
  3. EB Bjerregård, L Baastrup-Spohr, B Markussen, HH Bruun (2023), "Rapid and continuing regional decline of butterflies in eastern Denmark 1993-2019", Biological Conservation, volume 284, 110208, doi.org/10.1016/j.biocon.2023.110208
  4. EO Mensah, A Ræbild, R Asare, CA Amoatey, B Markussen, K Owusu, BK Asitoakor, P Vaast (2023), "Combined effects of shade and drought on physiology, growth, and yield of mature cocoa trees", Science of The Total Environment, volume 899, 165657, doi.org/10.1016/j.scitotenv.2023.165657
  5. SO Petersen, LEK Peixoto, H Sørensen, A Tariq, A Brændholt, LV Hansen, D Abalos, AT Christensen, CS Nielsen,JWM Pullens, S Bruun, LS Jensen, JE Olesen (2023), Higher N2O emissions from organic compared to synthetic N fertilisers on sandy soils in a cool temperate climate. Accepted for Agriculture, Ecosystems and Environment
  6. T Engedal, J Magid, V Hansen, J Rasmussen, H Sørensen, LS Jensen (2023), Cover crop root morphology rather than quality controls the fate of root and rhizodeposition C into distinct soil C pools. Accepted for Global Change Biology
  7. Lars R. Nielsen, Outi M. Tervo, Susanna B. Blackwell, Mads Peter Heide-Jørgensen and Susanne Ditlevsen: Using quantile regression and relative entropy to assess the period of anomalous behaviour of marine mammals following tagging, Ecology and Evolution, 13, e9967, 2023.
  8. Frederik H. Jensen, Outi M. Tervo, Mads Peter Heide-Jørgensen and Susanne Ditlevsen: Detecting narwhal foraging behaviour from accelerometer and depth data using mixed-effects logistic regression, Animal Biotelemetry, 11, 14, 2023.
  9. Andreas T Grasskamp, Meida Jusyte, Anthony W McCarthy, Torsten WB Götz, Susanne Ditlevsen, Alexander M Walter: Spontaneous neurotransmission at evocable synapses predicts their responsiveness to action potentials, Frontiers in Cellular Neuroscience, 17, 2023.
  10. S Skouw, CY Chow. H Sørensen, AC Bech, M Laureati, A Olsen, WLP Bredie (2023). A forced-choice pictographic method to measure food texture preferences among schoolchildren. Food Quality and Preference, Vol.105, 104783
  11. DOJ Reventlow, T Nord-Larsen, H Sørensen, JP Skovsgaard (2023). Effects of Norway spruce shelter density and soil scarification method on mortality and height growth of underplanted European beech, European silver fir and Douglas fir. Accepted for Forestry: An International Journal of Forest Research
  12. TL Wilkens, H Sørensen, MK Jensen, JD Furtado, LO Dragsted, KJ Mukamal (2023). Associations between Alcohol Consumption and HDL Subspecies Defined by ApoC3, ApoE and ApoJ: the Cardiovascular Health Study. Current Problems in Cardiology, Vol. 48, 101395
  13. AL Erhard, MA Silva, M Damsbo-Svendsen, B.M Karpantschof, H Sørensen, MB Frøst (2023). Acceptance of Insect Foods Among Danish Children: Effects of Information Provision, Food Neophobia, Disgust Sensitivity, and Species on Willingness to Try. Food Quality and Preference, Vol. 104, 104713
  14. Kenneth Thorø Martinsen, Kaj Sand-Jensen, Raghavendra Selvan. Predicting lake bathymetry from the topography of the surrounding terrain using deep learning . Limnology and Oceanography: Methods, 2023. (link)
  15. Haizea Goñi-Erro, Raghavendra Selvan, Roberto Leiras, Ole Kiehn. Pedunculopontine Chx10+ neurons control global motor arrest in mice . Nature Neuroscience, 2023. (link)
  16. Emil T. S. Kjær, Andy S. Anker, Marcus N. Weng, Simon J. L. Billinge, Raghavendra Selvan, Kirsten M. Ø. Jensen. DeepStruc: Towards structure solution from pair distribution function data using deep generative models . Digital Discovery, 2023
  17. Satyasaran Changdar, Olga Popovic, Tomke Susanne Wacker, Bo Markussen, Erik Bjørnager Dam, Kristian Thorup-Kristensen, Non-invasive Phenotyping for Water and Nitrogen Uptake by Deep Roots Explored using Machine Learning Plant and Soil, 2023.
  18. Sandeep Singh Sengar, Christopher Meulengracht, Mikael Ploug Boesen, Anders Føhrby Overgaard, Henrik Gudbergsen, Janus Damm Nybing, Mathias Perslev, Erik Bjørnager Dam. Multi‐planar 3D knee MRI segmentation via UNet inspired architectures International Journal of Imaging Systems and Technology, 2023.

2022

  1. K. Mundbjerg, M.L. Quaade, A. Tolver, P.E. Pedersen, E.F. Pedersen, A.S. Hammer (2022): Associations between Animal and Herd Manage- ment Factors and Urinary Tract Disease in Mink (Neovison Vision). Acta Scientific Veterinary Science, 4 (12), pp. 172-183.
  2. L.H. Omland, U.N. Joensen, B.G. Toft, C.M. Lund, H. Lindberg, M.B. Knudsen, A. Tolver, C. Suetta, H. Pappot (2022): Reasons for lack of treatment in patients with locally advanced, unresectable or metastatic urothelial carcinoma, Acta Oncologica, 61(9), pp. 1036-1042.
  3. B. Nair, I. Rodríguez Palomo, B. Markussen, C. Wiuf, S. Fiddyment, M. Collins: Parchment Glutamine Index (PQI): A novel method to estimate glutamine deamidation levels in parchment collagen obtained from low-quality MALDI-TOF data,  Peer Community Journal, Volume 3 (2023), article no. e10, doi : 10.24072/pcjournal.230. Recommended by Peer community in Archaeology.
  4. M. Levakova, J.H. Christensen, S. Ditlevsen (2022): Classification of brain states from EEG data that predicts future performance in visual tasks based on co-integration analysis, Royal Society Open Science, 9220621220621.
  5. EC Vansant, RB Kerr, H Sørensen, I Phiri, OT Westengen (2022). Exchange and Experimentation: Community Seed Banks Strengthen Farmers’ Seed Systems in Northern Malawi. International Journal of Agricultural Sustainability, Vol. 20, p. 1415-1436
  6. L.N. Noirot, D. Müller-Stöver, R. Wahyuningsih, H. Sørensen, Sudarno, A. Sinamora, Pujianto, Suhardi, J.-P. Caliman (2022), Impacts of empty fruit bunch applications on soil organic carbon in an industrial oil palm plantation. Journal of Environmental Management, Vol. 317, 115373.
  7. K. Loeppenthin, B.A. Esbensen, J.M. Klausen, M. Østergaard, J.F. Christensen, A. Tolver, T. Thomsen, J.S. Bech, P. Jennum (2022): Efficacy and Acceptability of Intermittent Aerobic Exercise on Polysomnography-Measured Sleep in People With Rheumatoid Arthritis With Self-Reported Sleep Disturbance: A Randomized Controlled Trial, ACR Open Rheumatology, Vol. 4, No.5, pp. 395-405. doi: 10.1002/acr2.11403. Epub 2022 Jan 28, PMID: 35089655, PMCID: PMC9096512.
  8. I. Husted Nielsen, K. Piil, A. Tolver, K. Grønbæk, L. Kjeldsen, M. Jarden (2022): Family caregiver ambassador support for caregivers of patients with newly diagnosed hematological cancer: a feasibility study, Supportive Care in Cancer, vol. 30, no. 8, pp. 6923-6935. 
  9. A. Mortensen, I. Wessel, S.N. Rogers, A. Tolver, M. Jarden (2022): Needs assessment in patients surgically treated for head and neck cancer—a randomized controlled trial, Supportive Care in Cancer, vol. 30, no. 5, pp. 4201-4218.

  10. Mikkelsen MK, Lund CM, Vinther A, Tolver A, Johansen JS, Chen I, Ragle AM, Zerahn B, Engell-Noerregaard L, Larsen FO, Theile S, Nielsen DL, Jarden M. (2022): Effects of a 12-Week Multimodal Exercise Intervention Among Older Patients with Advanced Cancer: Results from a Randomized Controlled Trial, Oncologist, Vol. 27, No. 1, p. 67–78.

  11. J.R.L. Kobbersmed, M.M.M. Berns, S. Ditlevsen, J.B. Sørensen, A.M. Walter (2022): Allosteric stabilization of calcium and phosphoinositide dual binding engages several synaptotagmins in fast exocytosis. eLife, 11:e74810.

  12. E.P. Nielsen, S. Andersen, C.L. Brand, S. Ditlevsen (2022): Applying Historical Data in a Nonlinear Mixed-Effects Model Can Reduce the Number of Control Rats Required for Calculation of The Relative Potency of Insulin Analogues. PLoS ONE, 17(6): e0257750.

  13. E.O. Mensah, R. Asare, P. Vaast, C.A. Amoatey, B. Markussen, K. Owusu, B.K. Asitoakor, A. Ræbild (2022). Limited effects of shade on physiological performances of cocoa (Theobroma cacao L.) under elevated temperature. Environmental and Experimental Botany, Vol. 21, September 2022, p. 104983.
  14. A. Koutouleas, T. Sarzynski, B. Bertrand, M. Bordeaux, A.S. Bosselmann, C. Campa, H. Etienne, N. Turreira-García, S. Léran, B. Markussen, P. Marraccini, J.C. Ramalho, P. Vaast, A. Ræbild (2022). Shade effects on yield across different Coffea arabica cultivars - how much is too much? A meta-analysis. Agronomy for Sustainable Development, Vol. 42, article 55.
  15. N. Musaqaf, L. Sigsgaard, B. Markussen, J.A. Stenberg (2022). Effects of strawberry resistance and genotypic diversity on aphids and their natural enemies. Biological Control, Vol. 170, No. 7, p. 104919.
  16. T.S. Wacker, O. Popovic, N.A.F. Olsen, B. Markussen, A.G. Smith, S.F. Svane, K. Thorup‐kristensen (2022). Semifield root phenotyping: Root traits for deep nitrate uptake. Plant, Cell and Environment, Vol. 45, No. 3, p. 823-836.
  17. A.B. Andersen, J. Bejder, T. Bonne, H. Sørensen, H. Sørensen, G. Jung, T Ganz, E. Nemeth, N.H. Secher, P.I. Johansson, N.B. Nordsborg (2022). Hepcidin and erythroferrone complement the Athlete Biological Passport in the detection of autologous blood transfusion. Medicine & Science in Sports & Exercise, 54(9):1604-1616
  18. SK Jacobsen, H Sørensen, L Sigsgaard (2022). Perennial flower strips consistently promote natural enemies, especially in their proximity. Crop Protection, Vol. 156, 105962
  19. Carbon footprint of selecting and training deep learning models for medical image analysis
    R Selvan, N Bhagwat, LF Wolff Anthony, B Kanding, EB Dam
    International Conference on Medical Image Computing and Computer-Assisted Intervention. 
  20. The KNee OsteoArthritis Prediction (KNOAP2020) challenge: An image analysis challenge to predict incident symptomatic radiographic knee osteoarthritis from MRI and X-ray images
    J Hirvasniemi, J Runhaar, RA van der Heijden, ..., EB Dam, ..., S Klein
    Osteoarthritis and Cartilage, 
  21. Multivariable Modeling of Biomarker Data From the Phase I Foundation for the National Institutes of Health Osteoarthritis Biomarkers Consortium
    David J Hunter, Leticia A Deveza, Jamie E Collins, Elena Losina, Jeffrey N Katz, Michael C Nevitt, John A Lynch, Frank W Roemer, Ali Guermazi, Michael A Bowes, Erik B Dam, Felix Eckstein, C Kent Kwoh, Steve Hoffmann, Virginia B Kraus
    Arthritis Care & Research
  22. Extracting Structural Motifs from Pair Distribution Function Data of Nanostructures using Explainable Machine Learning
    Andy S Anker, Emil TS Kjær, Mikkel Juelsholt, Troels Lindahl Christiansen, Susanne Linn Skjærvø, Mads Ry Vogel Jørgensen, Innokenty Kantor, Daniel Risskov Sørensen, Simon JL Billinge, Raghavendra Selvan, Kirsten Marie Ørnsbjerg Jensen
    NPJ Computational Materials
  23. Identifying partial mouse brain microscopy images from Allen reference atlas using a contrastively learned semantic space
    Justinas Antanavicius, Roberto Leiras, Raghavendra Selvan
    10th International Workshop on Biomedical Image Registration (WBIR2022)

  24. Above-ground biomass prediction for  croplands at a sub-meter resolution using uav–lidar and machine learning methods. Jaime C. Revenga, Katerina Trepekli, Stefan Oehmcke, Rasmus Jensen, Lei Li, Christian Igel, Fabian Cristian Gieseke, and Thomas Friborg. 
    Remote Sensing, 14(16), 2022. ISSN 2072-4292. doi: 10.3390/rs14163912

  25. Deep learning based 3d point cloud regression for estimating forest biomass.
    Stefan Oehmcke, Lei Li, Jaime C. Revenga, Thomas Nord-Larsen, Katerina Trepekli, Fabian Gieseke, and Christian Igel. 
    In International Conference on Advances in Geographic Information Systems (SIGSPATIAL). ACM, 2022. doi: 10.1145/3557915.3561471

  26. K Piil, S.L. Skovhus, A. Tolver, M. Jarden (2022): Neuro-oncological symptoms: a longitudinal quantitative study of family function, perceived support, and caregiver burden, Journal of Family Nursing, 28(1), pp. 43-56.

2021

  1. K.H. Norskov, D. Overgaard, J. Boesen, A. Struer, S.E.W.D. El-Azem, A. Tolver, K. Lomborg, L. Kjeldsen, M. Jarden (2021): Patient ambassador support in newly diagnosed patients with acute leukemia during treatment: a feasibility study, Supportive Care in Cancer, vol. 29, no. 6, pp. 3077 - 3089.
  2. EA Hughes, M. Maselli, H Sørensen, PJ Hansen (2021). Metabolic reliance on photosynthesis depends on both irradiance and prey availability in the mixotrophic ciliate, Strombidium cf. basimorphum. Frontiers in Microbiology, 12, 1577
  3. YK Kalkhajeh, B Huang, H Sørensen, PE Holm, HCB Hansen (2021), Phosphorus accumulation and leaching risk of greenhouse vegetable soils in Southeast China. Pedosphere, 31, 683–693
  4. L.H. Omland, D.R. Stormoen, L.H. Dohn, A. Carus, A.B. Als, N.V. Jensen, G.A. Taarnhøj, A. Tolver, H. Pappot (2021). Real-world study of treatment with pembrolizumab among patients with advanced urothelial tract cancer in Denmark. Bladder Cancer, 7, pp. 413-425.
  5. I Allodi, R Montañana-Rosell, R Selvan, P Löw, O Kiehn (2021), Locomotor deficits in a mouse model of ALS are paralleled by loss of V1-interneuron connections onto fast motor neurons, Nature Communications vol 12, Article number: 3251
  6. JS Jeppesen, AB Andersen, TC Bonne, M Thomassen, H Sørensen, NN Nordsborg, NV Olsen, JR Huertas, J Bejder (2021). Immature reticulocytes are sensitive and specific to low-dose erythropoietin treatment at sea level and altitude. Drug Testing and Analysis, 13, 1331-1340
  7. OM Tervo, S Ditlevsen, MC Ngo, NH Nielsen, SB Blackwell, TM Williams, MP Heide-Jørgensen (2021): Hunting by the stroke: How foraging drives diving behavior and swimming biomechanics of East-Greenland narwhals (Monodon monoceros). Frontiers in Marine Science, 7, 1244, DOI:10.3389/fmars.2020.596469
  8. MC Ngô, R Selvan, O Tervo, MP Heide-Jørgensen, S Ditlevsen (2021). Detection of foraging behavior from accelerometer data using U-Net type convolutional networks. Ecological Informatics., 62, 101275, 2021
  9. Desai, Caliva, Iriondo, ..., Perslev, Igel, Dam, ..., Chaudhari (2000). The international workshop on osteoarthritis imaging knee MRI segmentation challenge: a multi-institute evaluation and analysis framework on a standardized dataset. Radiology: Artificial Intelligence. e200078.
  10. Jimenez-Solem, E., Petersen, T. S., Hansen, C., Hansen, C., Lioma, C., Igel, C., ... R. Selvan, ... & Sillesen, M. (2021). Developing and validating COVID-19 adverse outcome risk prediction models from a bi-national European cohort of 5594 patients. Scientific reports, 11(1), 1-12.

  11. Klas Rydhmer, Raghavendra Selvan, Dynamic β-VAEs for quantifying biodiversity by clustering optically recorded insect signals, Ecological Informatics, 2021, 101456,
    ISSN 1574-9541, https://doi.org/10.1016/j.ecoinf.2021.101456

  12. David J Hunter, Leticia A Deveza, Jamie E Collins, Elena Losina, Michael C Nevitt, Frank W Roemer, Ali Guermazi, Michael A Bowes, Erik B Dam, Felix Eckstein, John A Lynch, Jeffrey N Katz, C Kent Kwoh, Steve Hoffmann, Virginia B Kraus, Multivariable modeling of biomarker data from the phase 1 Foundation for the NIH Osteoarthritis Biomarkers Consortium, Arthritis Care & Research, 2021

  13. Shuxuan Jing, Per Kryger, Bo Markussen, Birte Boelt, Pollination and Plant Reproductive Success of Two Ploidy Levels in Red Clover (Trifolium pratense L.), Frontiers in Plant Science, Vol. 12, 12 pages, 720069, 2021.
  14. Maria Gisbert-Queral, Arne Henningsen, Bo Markussen, Meredith T. Niles, Ermias Kebread, Angela J. Rigden, Nathaniel D. Mueller, Climate impacts and adaptation in US dairy systems 1981–2018, Nature Food, Vol. 2, p. 894-901, October 2021.
  15. Kaminski JM, Allodi I, Montañana-Rosell R, Selvan R, Kiehn O, Deep ensemble model for segmenting microscopy images in the presence of limited labeled data, Int. conference on Medical Imaging with Deep Learning, 2021 
  16. Jimenez-Solem E, ... Selvan R, ..., Developing and validating COVID-19 adverse outcome risk prediction models from a bi-national European cohort of 5594 patients, Scientific Reports, vol 11, 1, 2021
  17. Perslev M, Pai A, Runhaar J, Igel C, Dam EB, Cross‐Cohort Automatic Knee MRI Segmentation With Multi‐Planar U‐Nets, Journal of Magnetic Resonance Imaging, 2021
  18. Desai AD, ... Dam EB, ... Chaudhari A, The international workshop on osteoarthritis imaging knee MRI segmentation challenge: a multi-institute evaluation and analysis framework on a standardized dataset, Radiology: Artificial Intelligence, vol 3, 3, 2021
  19. Tummala S, Thadikemalla VSG, Kreilkamp BAK, Dam EB, Focke NK, Fully automated quality control of rigid and affine registrations of T1w and T2w MRI in big data using machine learning, Computers in Biology and Medicine, vol 139, 104997, 2021
  20. MAC Latz, MH Kerrn, H Sørensen, DB Collinge, B Jensen, JKM Brown, AM Madsen, HJL Jørgensen (2021), Succession of the fungal endophytic microbiome in wheat is dependent on tissue-specific interactions of host genotype and environment. Science of the Total Environment, 759, 143804
  21. CY Chow, RR Riantiningtyas, H Sørensen, MB Frøst (2021), School children cooking and eating insects as part of a teaching program - effects of cooking, insect type, tasting order and food neophobia on hedonic response. Food Quality and Preference, 87, 104027
  22. MM Frøsig, SRA Costa, J Liesche, JT Oesterberg, S Hanisch, S Nintemann, H Sørensen, M Palmgren, TG Pomorski, RL Lopez-Marques (2021), Pseudohyphal growth in Sacharomyces cerevisiae involves protein kinase-regulated lipid flippases. Journal of Cell Science, 133, 235994

  23. Tervo, Outi M., Blackwell, Susanna B., Ditlevsen, Susanne, Conrad, Alexander, Samson, Adeline L., Garde, Eva and Heide-Jørgensen, Mads Peter: Narwhals react to ship noise and airgun pulses embedded in background noise. Biology Letters, 17: 20210220, 2021

  24. Mads Peter Heide-Jørgensen, Susanna B Blackwell, Outi Tervo, Adeline L Samson, Eva Garde, Rikke G Hansen, Manh Cuong Ngo, Alexander S Conrad, Per Trinhammer, Hanse Christian Schmidt, Mikkel-Holger Strander Sinding, Terrie Williams and Susanne Ditlevsen: Behavioral response study on seismic airgun and vessel exposures in narwhals. Frontiers in Marine Science, 8:658173. doi: 10.3389/fmars.2021.658173, 2021.

2020

  1. Kundu, Ashinsky, Bouhrara, Dam, Demehri, Shifat-E-Rabbi, Spencer, Urish, Rohde (2000). Enabling early detection of osteoarthritis from presymptomatic cartilage texture maps via transport-based learning. Proceedings of the National Academy of Sciences, 117, 40, 24709-24719. 
  2. AS Anker, E TS Kjær, EB Dam, S JL Billinge, KMØ Jensen, R Selvan (2020). Characterising the atomic structure of mono-metallic nanoparticles from x-ray scattering data using conditional generative models. 16th International Workshop on Mining and Learning with Graphs (MLG), KDD
  3. K Mundbjerg, A Tolver, I Sebbelov, T Clausen, J Lundfold, AS Hammer (2020). Familial disease history and fur color type are associated with urinary tract disease in farmed mink (Neovison vison). Research in Veterinary Science 133: 326-331
  4. KH Nørskov, D Overgaard, J Boesen, A Struer, S El-Azem, A Tolver, K Lomborg, L Kjeldsen, M Jarden (2020). Patient ambassador support in newly diagnosed patients with acute leukemia during treatment: a feasibility study. Supportive Care in Cancer, 350, 2020, https://doi.org/10.1007/s00520-020-05819-w
  5. RC Neves, RM Stuart, Nadja Møbjerg (2020), New insights into the limited thermotolerance of anhydrobiotic tardigrades, Communicative & Integrative Biology, vol 13, pp 140-146
  6. A Søltoft-Jensen, MP Heide-Jørgensen, S Ditlevsen: Modelling the sound production of narwhals using a point process framework with memory effects. Annals of Applied Statistics 14(4), 2037-2052
  7. MP Heide-Jørgensen, S Blackwell, T Williams, MHS Sinding, M Skovrind, OM Tervo, E Garde, R Hansen, NH Nielsen, MC Ngo, S Ditlevsen (2020): Some like it cold: Temperature dependent habitat selection by narwhals. Ecology and Evolution, 10(15), 8073-8090
  8. JRL Kobbersmed, AT Grasskamp, M Jusyte, S Ditlevsen, JB Sørensen, AM Walter (2020): Rapid regulation of vesicle priming explains synaptic facilitation despite variable vesicle:Ca2+ channel distances. eLife, 9:e51032
  9. K Li, M Kadohisa, M Kusunoki, J Duncan, C Bundesen, S Ditlevsen (2020): Distinguishing between parallel and serial processing in visual attention from neurobiological data. Royal Society Open Science, 7(1), Article Number: 191553
  10. A Larsen, B Markussen, C Bundesen (2020), Comparing Exponential Race and Signal Detection Models of Encoding Stimuli Into Visual Short-Term Memory. Journal of Experimental Psychology: Human Perception and Performance, vol. 46, no. 6, pp. 643-655
  11. KM Kamstrup, B Markussen, A Hay‐Schmidt, F Thorup, PD Thomsen (2020), Staging of porcine embryos: Comparison of Standard Event System‐based statistical clusters with a Carnegie‐based staging system. Accepted for Developmental Dynamics, DOI10.1002/dvdy.187
  12. AG Smith, J Petersen, R Selvan, CR Rasmussen. Segmentation of roots in soil with U-Net. Accepted for Plant Science, 2020. 
  13. Neves RC, Hvidepil LKB, Sørensen-Hygum TL, Stuart RM, Møbjerg N (2020). Thermotolerance experiments on active and desiccated states of Ramazzottius varieornatus emphasize that tardigrades are sensitive to high temperatures. Accepted to Nature Scientific Reports.

2019

  1. L Witting, T Doniol-Valcroze, R Hobbs, S Ditlevsen, MP Heide-Jørgensen (2019): Meta-population modelling of narwhals in East Canada and West Greenland. Marine Fisheries Review, 81(3-4), 116-124
  2. J Runhaar, EB Dam, EHG Oei, SMA Bierma-Zeinstra.Medial Cartilage Surface Integrity as a Surrogate Measure for Incident Radiographic Knee Osteoarthritis following Weight Changes, Cartilage, 1947603519892305, 2019.
  3. SK Jacobsen I Klingen, J Eilenberg, B Markussen, L Sigsgaard (2019). Entomopathogenic fungal conidia marginally affect the behavior of the predators Orius majusculus (Hemiptera: Anthocoridae) and Phytoseiulus persimilis (Acari: Phytoseiidae) foraging for healthy Tetranychus urticae (Acari: Tetranychidae). Experimental & Applied Acarology. 79(3-4): 299–307
  4. C Kosawang, H Sørensen, ED Kjær, A Dilokpimol, LV McKinney, DB Collinge, LR Nielsen (2019), Defining the twig fungal communities of Fraxinus species and Fraxinus excelsior genotypes with differences in susceptibility to ash dieback. Fungal Ecology, 42, 100859.
  5. L Borg, J Sporring, EB Dam, VA Dahl, TB Dyrby, R Feidenhans, AB Dahl, J Pingel. Muscle fibre morphology and microarchitecture in cerebral palsy patients obtained by 3D synchrotron X-ray computed tomography. Computer in Biology and Medicine. Vol 107, 265-269, 2019. 
  6. SF Svane, EB Dam, JM Carstensen, K Thorup-Kristensen. A multispectral camera system for automated minirhizotron image analysis. Plant and Soil. 2019, 1-16. 
  7. DR Boilesen, E Ragonnaud, H Laursen, AC Andersson, A Tolver, K Spiess, P J Holst (2019), CD8+ T cells induced by adenovirus-vectored vaccine are capable of preventing establishment of latent murineγ-herpesvirus 68 infection. Vaccine, vol. 37, 2952-2959
  8. NL Olsen, P Herren, B Markussen, AB Jensen, J Eilenberg. Statistical modelling of conidial discharge of entomophthoralean fungi using a newly discovered Pandora species. PLoS ONE 14(5): e0215914. https://doi.org/10.1371/journal.pone.0215914
  9. L Witting, T Doniol-Valcroze, R Hoobs, S Ditlevsen, and MP Heide-Jørgensen: Meta-population modelling of narwhals in East Canada and West Greenland. To appear in Marine Fisheries Review
  10. K Li, S Ditlevsen: Neural decoding with visual attention using sequential Monte Carlo for leaky integrate-and-fire neurons. PLoS ONE, 14(5): e0216322, 2019. https://doi.org/10.1371/journal.pone.0216322
  11. MC Ngo, MP Heide-Jørgensen, S Ditlevsen: Understanding narwhal diving behaviour using Hidden Markov Models with dependent state distributions and long range dependence. PLoS Computational Biology, 15(3): e1006425, 2019. https://doi.org/10.1371/journal.pcbi.1006425
  12. HE Blossom, B Markussen, N Daugbjerg, B Krock, A Norlin, P Juel Hansen (2019). The Cost of Toxicity in Microalgae: Direct Evidence From the Dinoflagellate Alexandrium. Frontiers in Microbiology, vol. 10, 1065.
  13. L Pedersen, NM Jakobsen, R Strandberg, K Thorup, AP Tøttrup (2019). Sex-specific differencein migration schedule as a precurser of protandry in a log-diastance migratory bird. Science of Nature, vol. 106(7-8). https://doi.org/10.1007/s00114-019-1637-6
  14. JF Christensen, A Sundberg, J Osterkamp, S Thorsen-Streit, AB Nielsen, CK Olsen, SS Djurhuus, C Simonsen, T Schauer, H Ellingsgaard, K Østerlind, P-M Krarup, C Mosgaard, K Vistisen, A Tolver, BK Pedersen, P Hojman (2019). Interval-Walking Improves Glycaemic Control and Body Composition after Cancer Treatment: A Randomized Controlled Trial. Journal of Clinical Endocrinology & Metabolism 104(9):3701-3712. 
  15. SR Jønsson, S Angka, K Olsen, A Tolver, A. Olsen (2019). Repeated exposure to vegetable-enriched snack bars in children may increase liking for the bars - but not the vegetables. Appetite, vol. 140, 1-9
  16. ED Bjerre, K Brasso, AB Jørgensen, TH Petersen, AR Eriksen, A Tolver, JF Christensen, MH Poulsen, SS Madsen, PB Østergren, M Borre, P Krustrup, C Johansen, M Rørth, J Midtgaard (2019). Football Compared with Usual Care in Men with Prostate Cancer (FC Prostate Community Trial): A Pragmatic Multicentre Randomized Controlled Trial. Sports Medicine, vol 49, 145–158
  17. NP Kocaturk, K Zwart, S Bruun, LS.Jensen, H Sørensen, L Brussaard (2019). Recovery of nutrients from the liquid fraction of digestate: Use of enriched zeolite and biochar as nitrogen fertilisers. Journal of Plant Nutrition and Soil Science, 182:187-195
  18. J Petersen, AM Arias-Lorza, R Selvan, D Bos, A van der Lugt , JH Pedersen, M Nielsen, M de Bruijne (2019). Increasing Accuracy of Optimal Surfaces Using Min-marginal Energies. IEEE Transactions on Medical Imaging, Vol 37, 7, 1559-1568, 2019.
  19. MM Ghazi, M Nielsen, A Pai, MJ Cardoso, M Modat, S Ourselin, L Sørensen (2019). Training recurrent neural networks robust to incomplete data: application to Alzheimer’s disease progression modeling. Medical Image Analysis, Vol 53, 39-46, 2019.
  20. S Jacobsen, GJ Moraes, H Sørensen, L Sigsgaard (2019). Organic cropping practice decreases pest abundance and positively influences predator-prey interactions. Agriculture, Ecosystems and Environment, 272, 1-9
  21. R Asare, B Markussen, RA Asare, G Anim-Kwapong, A Ræbild (2019). On-farm cocoa yields increase with canopy cover of shade treesin two agro-ecological zones in Ghana. Climate and Development, 11: 435-445 DOI: 10.1080/17565529.2018.1442805

2018

  1. MK Mikkelsen, CM Lund, A Vinther, A Tolver, AM Ragle, JS Johansen, I Chen, L Engell-Noerregaard, FO Larsen, B Zerahn, DL Nielsen, M Jarden (2018). Engaging the older cancer patient : Patient Activation through Counseling, Exercise and Mobilization - Pancreatic, Biliary tract and Lung cancer (PACE-Mobil-PBL) - study protocol of a randomized controlled trial. BMC Cancer, 18: 934.
  2. TL Sørensen-Hygum, RM Stuart, A Jørgensen, N Møbjerg (2018). Modelling extreme desiccation tolerance in a marine tardigrade. Scientific Reports 8:11495, DOI:10.1038/s41598-018-29824-6
  3. R Selvan, M Welling, JH Pedersen, J Petersen, M de Bruijne (2018). Mean field network based graph refinement with application to airway tree extraction. 21st Conference on Medical Image Computing & Computer Assisted Intervention (MICCAI).
  4. S Darkner, A Pai, MG Liptrot, J Sporring (2018). Collocation for Diffeomorphic Deformations in Medical Image Registration. IEEE transactions on pattern analysis and machine intelligence 40 (7), 1570-1583
  5. EB Dam, J Runhaar, S Bierma‐Zienstra, M Karsdal (2018). Cartilage cavity—an MRI marker of cartilage lesions in knee OA with Data from CCBR, OAI, and PROOF. Magnetic resonance in medicine 80 (3), 1219-1232
  6. S Tummala, D Schiphof, I Byrjalsen, EB Dam (2018). Gender Differences in Knee Joint Congruity Quantified from MRI: A Validation Study with Data from Center for Clinical and Basic Research and Osteoarthritis Initiative. Cartilage 9 (1), 38-45
  7. CB Marschner, B Wiinberg, I Tarnow, I., B Markussen, L Kühnel, L Bochsen, AT Kristensen (2018). The influence of inflammation and hematocrit on clot strength in canine thromboelastographic hypercoagulability. Journal of Veterinary Emergency and Critical Care, 28(1), 20-30. https://doi.org/10.1111/vec.12675
  8. LM Di Lucchio, R Fensholt, B Markussen, A Ræbild, A. Leaf phenology of thirteen African origins of baobab (Adansonia digitata (L.)) as influenced by daylength and water availability. Ecology and Evolution, 2018:8, 11261-11272
  9. S Ditlevsen, H Sørensen, PK Andersen (2018). Sammenhænge, risici, behandlingseffekter – kan vi stole på forskningsresultaterne? Practicus, August 2018.
  10. Blackwell, S., Tervo, O., Conrad, A., Sinding, M., Hansen, R., Ditlevsen, S., and Heide-Jørgensen, M.: Spatial and temporal patterns of sound production in East Greenland narwhals. PLoS ONE, 13(6): e0198295. https://doi.org/10.1371/journal. pone.0198295.
  11. Data Science Lab tester deep learning over for klassisk billedanalyse i planteforskning. Ingeniøren, September 2018.
  12. A Reiss, SK Mathiassen, RM Stuart, P Kudsk (2018), Weed suppression by winter cereals: relative contribution of competition for resources and allelopathy. Chemoecology 28(4-5), 109-121
  13. AGC de Azevedo, RM Stuart, L Sigsgaard (2018). Presence of a generalist entomopathogenic fungus influences the oviposition behaviour of an aphid-specific predator. BioControl 63(5), 655-664
  14. JH Christensen, B Markussen, C Bundesen, S Kyllingsbæk (2018). A physiologically based nonhomogeneous Poisson counter model of visual identification. Journal of Experimental Psychology: Human Perception and Performance, 44(9), 1383-1398
  15. NEI Ahlstrand, N Havskov Reghev, B Markussen, HCB Hansen, F Eiriksson, M Thorsteinsdottir, N Rønsted, CJ Barnes (2018). Untargeted metabolic profiling reveals geography as the strongest predictor of metabolic phenotypes of a cosmopolitan weed. Ecology and Evolution 8, 6812-6826.
  16. E Garde, S Jung-Madsen, S Ditlevsen, RG Hansen, KB Zinglersen and MPeter Heide-Jørgensen (2018): Diving behaviour of the Atlantic walrus in high Arctic Greenland and Canada. Journal of Experimental Marine Biology and Ecology, 500, 89-99.
  17. E Garde, MF Bertelsen, S Ditlevsen, M-P Heide-Jørgensen, NH Nielsen, AK Frie, D Olafsdottir, U Siebert, SH Hansen (2018). Accuracy of the aspartic acid racemization technique in age estimation of mammals and the influence of body temperature. NAMMCO Scientific Publications 10, DOI 10.7557/3.4400
  18. C. Pentzold, S.A. Shah N.R. Hansen, B. Le Tallec, A. Seguin-Orlando, M. Debatisse, M. Lisby, V.H. Østergaard (2018). FANCD2 binding identifies conserved fragile sites at large transcribed genes in avian cells. Nucleic Acids Research, 46, pp 1280–1294.
  19. Y.K. Kalkhajeh, H. Sørensen, B. Huang, D.-X. Guan, J. Luo, W. Hu, P.E. Holm, H.C.B. Hansen (2018). DGT technique to assess P mobilization from greenhouse vegetable soils in China: A novel approach. Science of the Total Environment, 630, 331-339.
  20. C.B. Marschner, B. Wiinberg, I. Tarnow, B. Markussen, L. Kühnel, L. Bochsen, A.T. Kristensen (2018). The influence of inflammation and hematocrit on clot strength in canine thromboelastographic hypercoagulability. J. Vet. Emergency Critical Care, 28(1): 20-30.
  21. Arndal MF, Tolver A, Schmidt IK, Larsen KS, Beier C (2018). Fine root growth and vertical distribution in response to  elevated CO2, warming and drought in a mixed heathland-grassland. Ecosystems 21(1): 15-30.
  22. M. Nicolaisen, N.D. Cuong, J. Herschend, P. van Du, J. Sørensen, L.C. Loan, H. Sørensen, B. Jensen, S. Olsson (2018). Biological control of rice sheath blight using hyphae-associated bacteria - development of a in planta screening assay to predict BCA performance under field conditions. BioControl, 63, 843-853.

2017

  1. NH Nielsen, GA Vikingsson, SH Hansen, S Ditlevsen and MP Heide-Jørgensen (2017): Two techniques of age estimation in cetaceans: GLGs in teeth and earplugs, and measuring the AAR rate in eye lensnucleus. NAMMCO Scientific Publications, 10, DOI 10.7557/3.4184
  2. R. Asara, R.A. Asare, W.A. Asante, B. Markussen, A. Ræbild (2017). Influences of shading and fertilization on on-farm yields of cocoa in Ghana. Experimental Agriculture, 53, 416-431.
  3. M.V. Nielsen, E. Nadeau, B. Markussen, C. Helander, M. Eknæs, P. Nørgaard (2017). The relation between energy intake and chewing index of diets fed to nursing ewes. Small Ruminant Research, 153, 180-188.
  4. M. Hansen, T. Bang-Andreasen, H. Sørensen, M. Ingerslev (2017). Micro vertical changes in soil pH and base cations over time after application of wood ash on forest soil. Forest Ecology and Management, 406, 274--280.
  5. A.B. Muñoz, W.J. Eldridge, N.M. Jakobsen, H. Sørensen, A. Wax, M. Costa (2017). Cellular shear stiffness reflects arsenic-induced transformation. Carcinogenesis 39(2): 109-117.
  6. Xu H, Andersson AM, Ragonnaud E, Boilesen D, Tolver A,  Jensen BAH, Nicosia A, Folgori A, Colloca S, Cortese R, Thomsen AR, Christensen JP, Veazey RS, Holst PJ (2017). Vaccination with MHC class II associated Invariant chain linked tat, vif, rev and vpr confers protection against SIV mac251 challenge. EBioMedicine, 18, pp. 204-215.
  7. M Hollmer, JL Willesen, A Tolver, J Koch (2017). Left atrial volume and function in dogs with naturally occurring myxomatous mitral valve disease. Journal of Veterinary Cardiology, 19, 24-34.
  8. P. Elsborg, J. M. Wikman, G. Nielsen, A. Tolver, A.-M. Elbe (2017). Development and Initial Validation of the Volition in Exercise Questionnaire (VEQ) Measurement in Physical Education and Exercise Science, 21, 57-68. DOI: 10.1080/1091367X.2016.1251436
  9. SJ Traving, O Rowe, NM Jakobsen, H Sørensen, J Dinasquet, CA Stedmon, A Andersson, L Riemann (2017). The effect of increased loads of dissolved organic matter on estuarine microbial community composition and function. Frontiers in Microbiology, 8, Article 351. DOI: 10.3389/fmicb.2017.00351

2016

  1. K Li, V Kozyrev, S Kyllingsbæk, S Treue, S Ditlevsen, C Bundesen (2016): Neurons in primate visual cortex alternate between responses to competing stimuli in their receptive field. Frontiers in Computational Neuroscience, 10:141, DOI:10.3389/fncom.2016.00141.
  2. S.J. Traving, M. Bentzon-Tilia, H. Knudsen-Leerbeck, M. Mantikci, J.L.S. Hansen, C.A. Stedmon, H. Sørensen, S. Markager, L. Riemann (2016). Coupling bacterioplankton populations and environment to community function in coastal temperate waters. Frontiers in Microbiology (Aquatic Microbiology), 7, Article 1533. DOI: 10.3389/fmicb.2016.01533
  3. Bjerre E, Bruun DM, Tolver A, Brasso K, Krustrup P, Johansen C, Christensen R, Rørth M, Midtgaard J (2016). Effectiveness of community-based football compared to usual care in men with prostate cancer: protocol for a randomised, controlled, parallel-group, multi-centre superiority trial. BMC Cancer, 16(1):767.
  4. LM Jensen, B Markussen, NI Nielsen, E Nadeau, MR Weisbjerg, P Nørgaard (2016). Description and evaluation of a net energy intake model as a function of dietary chewing index. J. Dairy Sci., 99, 1-17. DOI: dx.doi.org/10.3168/jds.2015-10389
  5. M Höllmer, JL Willesen, A Tolver, J Koch (2016): Comparison of four echocardiographic methods to determine left atrial size in dogs. Journal of Veterinary Cardiology 18, 137–145.
  6. Petersen, MB; Tolver, A; Husted, L; Tølbøll, TH; Pihl, TH (2016). Repeated measurements of blood lactate concentration as a prognostic marker in horses with acute colitis evaluated with classification and regression trees (CART) and random forest analysis. The Veterinary Journal, 213, 18-23.
  7. J Geldmann, J Heilmann-Clausen, TE Holm, I Levinsky, B Markussen, K Olsen, C Rahbek, AP Tøttrup (2016). What determines spatial bias in citizen science? Exploring four recording schemes with different proficiency requirements. Diversity and Distributions, 22, 1139-1149. doi:10.1111/ddi.12477
  8. C Heimes, N Agerbirk, H Sørensen, T van Molken, TP Hauser (2016): Ecotypic differentiation of two sympatric chemotypes of Barbarea vulgaris (Brassicaceae) with different biotic resistances. Plant Ecology, 217, 1055-1068. DOI: 10.1007/s11258-016-0631-8.
  9. S Christensen, H Sørensen, KR Munk, TP Hauser (2016): A hybridisation barrier between two evolutionary lineages of Barbarea vulgaris (Brassicaceae) that differ in biotic resistances. Evolutionary Ecology, 30, 887-904. DOI: 10.1007/s10682-016-9858-z
  10. JS Madsen, HL Røder, J Russel, H Sørensen, M Burmølle, Sørensen (2016): Co-existence facilitates interspecific biofilm formation in complex microbial communities. Environmental Microbiology, 18, 2565-2574. DOI: 10.1111/1462-2920.13335.

2015

  1. MG Ruse, LR Søndergaard, S Ditlevsen, M Damgaard, S Fuglsang, JT Ottesen, JL Madsen: Absorption and initial metabolism of 75Se-L-selenomethionine: a kinetic model based on dynamic scintigraphic data. British Journal of Nutrition, 114:1718-1723, 2015. 
  2. E Garde, SH Hansen, S Ditlevsen, KB Tvermosegaard, K Harding, J Hansen and MP Heide-Jørgensen: Life history parameters of narwhals from Greenland. Journal of Mammalogy, 96(4):866-879, 2015. 
  3. MV Nielsen, E Nadeau, B Markussen, M Eknæs, P Nørgaard: Relationship between energy intake and chewing index of diets fed to pregnant ewes. Small Rudiment Research, vol 130, pp 108-116, 2015.
  4. LM Jensen, NI Nielsen, E Nadeau, B Markussen, P Nørgaard: Evaluation of five models predicting feed intake by dairy cows fed total mixed rations, Livestock Science, vol. 176, pp. 91–103, 2015.
  5. Løppenthin, K., Esbensen, B. A., Østergaard M., Jennum, P., Tolver, A., Aadahl M., Thomsen, T. & Midtgaard, J.: Physical Activity and the Association with Fatigue and Sleep in Danish Patients with Rheumatoid Arthritis. Rheumatology International, to appear.
  6. A Tnibar, H Schougaard, L Camitz, J Rasmussen, M Koene, W Jahn, B Markussen: An intern multi-centre prospective study on the fficacy of an intraarticular polyacrylamide hydrogel in horses with ostearthritis: a 24 months follow-up. Acta Veterinaria Scandinavica, 57:20, 2015.
  7. K Løppenthin, BA Esbensen, P Jennum, M Østergaard, A Tolver, T Thomsen, J Midtgaard: Sleep quality and correlated of poor sleep in patients with rheumatoid arthrisis. Clinical Rheumatology, to appear.
  8. Z.H.N. Bouda, J.Bayala, J.S. Jensen, B. Markussen, A. Ræbild: Reactions of Adansonia digitata L. provenances to long-term stress at seedling stage. Agroforestry Systems, 89: 113-123, 2015.
  9. M Oelofse, B Markussen, L Knudsen, K Schelde, JE Olesen, L Stoumann Jensen, S Bruun: Do soil organic carbon levels affect potentiel yields and nitrogen use efficiency? An analysis of winter wheat and spring barley field trials. European Journal og Agronomy, 66: 62-73, 2015.
  10. P. Khanal, A.M.D. Axel, A.H. Kongsted, S.V. Husted, L. Johnsen, D. Pandey, M. Birtwistle, B. Markussen, H.N. Kadarmideen, M.O. Nielsen: Late gestation under- and overnutrition have differential impacts when combined with a post-natal obesogenic diet on glucose-lactate-insulin adaptations during metabolic challenges in adolescent sheep. Acta Physiologica, 213: 519-536, 2014.
  11. H. Mathiasen, H. Sørensen, J. Bligaard, P. Esbjerg: Effect of temperature on reproduction and embryonic development of the cabbage stem flea beetle. Journal of Applied Entomology, to appear. DOI: 10.1111/jen.12201
  12. M. Prem, H.C.B. Hansen, W. Wenzel, L. Heiberg, H. Sørensen, O.K. Borggaard: High spatial and fast changes of iron redox state and phosphorus solubility in a seasonally flooded temerate wetland soil. Wetlands, forthcoming. DOI 10.1007/s13157-014-0608-0

2014

  1. Byskov, M. V., Schulze, A-K. S., Weisbjerg, M. R., Markussen, B. & Nørgaard, P: Recording rumination time by a rumination monitoring system in Jersey heifers fed grass/clover silage and hay at three freeding levels. Journal of Animal Science, 92, 1110-1118, 2014.
  2. M. Trøseid, S. Ditlevsen, T. Hviid, J. Gerstoft, T. Grøndahl Hansen, B. Klarlund Pedersen, S. Dam Nielsen, B. Lindegaard. Reduced trunk fat and triglycerides after strength training are associated with reduced LPS levels in HIV-infected individuals. Journal of Acquired Immune Deficiency Syndromes, 66(2): e52-e54, 2014. 
  3. R Langhorn, I Tarnow, J Willesen, M Kjelgaard-Hansen, I Skovgaard, J Koch: Cardiac troponin I and T as prognostic markers in cats with hypertrophic cardiomyopathy. Journal of veterinary internal medicine / American College of Veterinary Internal Medicine, 28, 1485-1491, 2014. 
  4. T Lygren, S Hansen, H Langberg, J Fjeldborg, S Jacobsen, MO Nielsen, P Schjerling, B Markussen, PD Thomsen, LC Berg: Serum insulin-like growth factor 1 in the aging horse. Veterinary Clinical Pathology, 43, 557-560, 2014.
  5. M. Cramer Pedersen, S. Laugesen Hansen, B. Markussen, L. Arleth, K. Mortensen:  Quantification of the information in small-angle scattering data, J. Appl. Cryst. 47, 2000–2010, 2014.
  6. HB Topbjerg, KP Kaminski, B Markussen, K Kørup, KL Nielsen, HG Kirk, MN Andersen, F Liu: Physiological factors affecting intrinsic water use efficiency of potato clones within a dihaploid mapping population under well-watered and drought-stressed conditions. Scientia Horticulturae, 178, 61-69, 2014. 
  7. Christensen, J. F., Tolver, A.Jones, Andersen, J. L, Rørth, M., & Daugaard, G.: Resistance Training Does Not Protect Against Increases in Plasma Cytokine Levels Among Germ Cell Cancer Patients During and After Chemotherapy. Journal of Clinical Endocrinology Metabolism, Vol. 99 (8), pp. 2967-2976, 2014.
  8. Christensen, J. F., Jones, L. W., Tolver, A., Andersen, J. L, Adamsen, L., Højman, P., Nielsen, R. H., Rørth, M., & Daugaard, G.: Safety and ecacy of resistance training in germ cell cancer patients undergoing chemotherapy: a randomized controlled trial. British Journal of Cancer, Vol. 111, pp. 8-16, 2014
  9. MJ Reiman, JE Møller, J Haggstrøm, B Markussen, AEW Holen, T Falk, LH Olsen. R-R interval variations influence the degree of mitral regurgitation in dogs with myxomatous mitral valve disease. The Veterinary Journal, 199, 348-354, 2014.
  10. S Paul, JF Agger, JS Agerholm, B Markussen. Prevalence and risk factors of Coxiella burnetti seropositivity in Danish beef and dairy cattle at slaughter adjusted for test uncertainty. Preventive Veterinary Medicine, 113: 504-511, 2014.
  11. AH Kongsted, MP Thygesen, SV Husted, MH Oliver, A Tolver, VG Christensen, JH Nielsen, MO Nielsen. Programming of the glucose-insulin homeostasis: Long-term consequences of prenatal versus early postnatal nutrition insults. Evidence from a sheep model. Acta Physiologica, 210: 84-98, 2014.

2013

  1. BL Madsen, VB Matthews, C Brandt, P Hojman, TL Allen, E Estevez, CR Bruce, OH Mortensen, S Syberg, C Rudnicka, J Abildgaard, H Pilegaard, J Hidalgo, S Ditlevsen, TJ alsted, AN Madsen, BK Pedersen, MA Febbraio. Interleukin-18 activates skeletal muscle AMPK and reduces weight gain and insulin resistance in mice. Diabetes 62, 3064-3074, 2013.
  2. H Sørensen, J Goldsmith, LM Sangalli. An introduction with medical applications to functional data analysis. Statistics in Medicine, 32, 5222-5240, 2013.
  3. AH Kongsted,  SV Husted, MP Thygesen, VG Christensen, D Blanche, A Tolver, T Larsen, B Quistorff, MO Nielsen. Pre- and postnatal nutrition in sheep affects beta-cell secretion and hypothalamic control. Journal of Endocrinology 219, 159-171, 2013.
  4. M Hollmer. JL Willesen, A Tolver, J Kocj. Left atrial volume and phasic function in clinically healthy dogs of 12 different breeds. Veterinary Journal 197, 639-645, 2013.
  5. J Midtgaard, J Christensen, A Tolver. L Jones, J Uth, B Rasmussen, L Tang, L Adamsen, M Rørth. Efficacy of multimodel exercise-based rehabilitation on physical activity, cardiorespiratoryf fitness, and patient-reported outcomes in cancer survivors: A randomized controlled trial. Annals of Oncology, 24, 2267-2273, 2013.
  6. DH Smith, IJ Christensen, NF Jensen, B Markussen, S Muller, HJ Nielsen, N Brunner, KV Nielsen. An explorative analysis of ERCC1-19q13 copy number aberrations in a chemonaive stage III colorectal cancer cohort, BMC Cancer 2013, 13:489.
  7. LN Thomsen, LC Berg, B Markussen, PD Thomsen. Synovial folds in equine articular process joints. Equine Veterinary Journal, 2013, 45: 448-453.
  8. RW Berg, S Ditlevsen. Synaptic inhibition and excitation estimated via the time constant of membrane potential fluctuations. Journal of Neurophysiology, 2013; 110: 1021-1034.
  9. B Lindegaard, S Ditlevsen, P Plomgaard, B Mittendorfer, BK Pedersen. Acute reduction of lipolysis reduces adiponectin and IL-18 - evidence from an intervention study with acipimox and insulin. Diabetologia, 2013; 56: 2034-2043.
  10. NH Nielsen, E Garde, MP Heide-Jørgensen, CH Lockyer, S Ditlevsen, D Olafsdottir, SH Hansen. Application of a novel mehod for age estimation of a baleen whale and a porpoise. Marine Mammal Science, 29(2), E1-E23, 2013.
  11. Jarden, Adamsen, Kjeldsen, Birgens, Tolver, Christiansen, Stensen, Sørensen, Møller. The emrging role of exercise and health counseling in patients with acute leukemia undergoing chemotherapy during outpatient management. Leukemia Research, vol. 37 (2013), 155-161.
  12. DH Smith, IJ Christensen, NF Jensen, B Markussen, MU Rømer, SB Nygard, S Muller, HJ Nielsen, N Brunner, KV Nielsen. Mechanisms of Topoisomerase I (TOP1) Gene Copy Number Increase in a Stage III Colorectal Cancer Patient Cohort. PLOS ONE, vol 8, issue 4.
  13. Bouda ZH-N, Bayala J, Markussen B, Jensen JS, Ræbild A. Provenance variation in survival, growth and dry matter partitioning of Parkia biglobosa (Jacq.) R.Br. ex G.Don seedlings in response to water stress. Agroforestry Systems, 2013; vol. 87:59-71

2012

  1. Forslund A, Ensink JHJ, Markussen B, Battilani A, Psarras G, Gola S et al. Escherichia coli contamination and health aspects of soil and tomatoes (Solamun lycopersicum L.) subsurface drip irrigated with on-site treated domestic wastewater. Water Research. 2012;46(18):5917-5934
  2. Paul S, Agger JFG, Markussen B, Christoffersen A-B, Agerholm JS. Factors associated with Coxiella burnetii antibody postitivty in Danish dairy cows. Preventive Veterinary Medicine. 2012;(107):57-64
  3. Andreasen EB, Tranholm M, Wiinberg B, Markussen B, Kristensen AT. Haemostatic alterations in a group of canine cancer patients are associated with cancer type and disease progression. Acta Veterinaria Scandinavica (Online). 2012;54(3)
  4. Kyllingsbæk S, Markussen B, Bundesen C. Testing a poisson counter model for visual identification of briefly presented, mutually confusable single stimuli in pure accuracy tasks. Journal of Experimental Psychology: Human Perception and Performance. 2012;38(3):628-642
  5. Thiele J, Markussen B. Potential of GLMM in modelling invasive spread. CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources. 2012;7(16)
  6. Nina Cedergreen, Helle Sørensen, Claus Svendsen (2012). Can the effect of ternary mixtures be predicted from binary mixture toxicity results? Science of the Total Environment, 427-428,
  7. Helle Sørensen, Anders Tolver Jensen, Maj Halling Thomsen, Pia Haubro Andersen (2012). Quantification of symmetry for functional data with application to equine lameness classification. Journal of Applied Statistics, 39, 337-360
  8. Eva Garde, Mads Peter Heide-Jørgensen, Susanne Ditlevsen.  Aspartic acid racemization rate in narwhal (monodon moncerus) eye lens nuclei estinated by counting of growth layers in tusks. Polar Research 2012, 31, 15865.